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The [Parallel Primitives] (from [https://kazocsaba.blogspot.com/ Kazó Csaba], who also https://code.google.com/p/bridj/wiki/CreditsAndLicense contributes to JavaCL) provides reduction and scan utilities that go beyond Goodies those provided in JavaCL, and more...
ScalaCL (BSD-licensed) is an optimizing Scala compiler plugin + GPU-backed collections.
It uses JavaCL, which is still accessible directly if needed.
"Encog is an advanced neural network and machine learning framework."
There appears to be experimentations with JavaCL (and other bindings) to perform GPGPU.